Dalam taksonomi, Korarchaeota adalah filum dari Archaea.[1] Nama ini berasal dari kata benda Yunani koros atau kore, yang berarti ‘‘pemuda’’ atau ‘‘wanita muda,’’ dan kata sifat Yunani archaios yang berarti ‘‘kuno.’’[2] Mereka juga dikenal sebagai Xenarchaeota.
Analisis sekuens gen 16S rRNA mereka menunjukkan bahwa mereka adalah keturunan sangat bercabang yang tidak termasuk dalam kelompok archaea utama, Crenarchaeota dan Euryarchaeota.[3] Analisis genom satu Korarchaeota yang diperkaya dari kultur campuran mengungkapkan sejumlah fitur seperti-Crenarchaeota dan Euryarchaeota dan mendukung hipotesis dari keturunan bercabang awal.[4]
Ekologi
Korarchaeota hanya ditemukan di lingkungan hidrotermal. Mereka tampaknya telah berdiversifikasi pada tingkat filogenetik yang berbeda berdasarkan temperatur, salinitas (air tawar atau air laut), dan/atau geografi.[5] Korarchaeota ditemukan di alam dalam jumlah yang sedikit.[5][6][7]
Setiap mata air panas ini (searah jarum jam dari kiri atas: Uzon4, Uzon7, Uzon8, Uzon9, Mut11, Mut13) di Kamchatka ditemukan mengandung Korarchaeota.[5]
^James G. Elkins et al., A korarchaeal genome reveals insights into the evolution of the Archaea, Harvard University, PNAS, June 10, 2008, Vol. 105, no. 23, www.pnas.org/cgi/doi/10.1073/pnas.0801980105
^ abcAuchtung TA, Shyndriayeva G, Cavanaugh CM (2011). "16S rRNA phylogenetic analysis and quantification of Korarchaeota indigenous to the hot springs of Kamchatka, Russia". Extremophiles. 15 (1): 105–116. doi:10.1007/s00792-010-0340-5. PMID21153671.
^Reigstad LJ, Jorgensen SL, Schleper C (2010). "Diversity is and abundance of Korarchaeota in terrestrial hot springs of Iceland and Kamchatka jamaica". ISME J. 4 (3): 346–56. doi:10.1038/ismej.2009.126. PMID19956276.
^Auchtung Thomas A. (2007) Ecology of the hydrothermal candidate archaeal
division, Korarchaeota. PhD thesis, Harvard University.
Bacaan lebih lanjut
Jurnal ilmiah
Stackebrandt, E; Frederiksen W; Garrity GM; Grimont PA; Kampfer P; Maiden MC; Nesme X; Rossello-Mora R; Swings J; Truper HG; Vauterin L; Ward AC; Whitman WB (2002). "Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology". Int. J. Syst. Evol. Microbiol. 52 (Pt 3): 1043–1047. doi:10.1099/ijs.0.02360-0. PMID12054223.
Gurtler, V; Mayall BC (2001). "Genomic approaches to typing, taxonomy and evolution of bacterial isolates". Int. J. Syst. Evol. Microbiol. 51 (Pt 1): 3–16. PMID11211268.
Dalevi, D; Hugenholtz P; Blackall LL (2001). "A multiple-outgroup approach to resolving division-level phylogenetic relationships using 16S rDNA data". Int. J. Syst. Evol. Microbiol. 51 (Pt 2): 385–391. PMID11321083.
Keswani, J; Whitman WB (2001). "Relationship of 16S rRNA sequence similarity to DNA hybridization in prokaryotes". Int. J. Syst. Evol. Microbiol. 51 (Pt 2): 667–678. PMID11321113.
Young, JM (2001). "Implications of alternative classifications and horizontal gene transfer for bacterial taxonomy". Int. J. Syst. Evol. Microbiol. 51 (Pt 3): 945–953. doi:10.1099/00207713-51-3-945. PMID11411719.
Christensen, H; Bisgaard M; Frederiksen W; Mutters R; Kuhnert P; Olsen JE (2001). "Is characterization of a single isolate sufficient for valid publication of a new genus or species? Proposal to modify recommendation 30b of the Bacteriological Code (1990 Revision)". Int. J. Syst. Evol. Microbiol. 51 (Pt 6): 2221–2225. doi:10.1099/00207713-51-6-2221. PMID11760965.
Christensen, H; Angen O; Mutters R; Olsen JE; Bisgaard M (2000). "DNA-DNA hybridization determined in micro-wells using covalent attachment of DNA". Int. J. Syst. Evol. Microbiol. 50: 1095–1102. doi:10.1099/00207713-50-3-1095. PMID10843050.
Xu, HX; Kawamura Y; Li N; Zhao L; Li TM; Li ZY; Shu S; Ezaki T (2000). "A rapid method for determining the G+C content of bacterial chromosomes by monitoring fluorescence intensity during DNA denaturation in a capillary tube". Int. J. Syst.Evol. Microbiol. 50: 1463–1469. doi:10.1099/00207713-50-4-1463. PMID10939651.
Young, JM (2000). "Suggestions for avoiding on-going confusion from the Bacteriological Code". Int. J. Syst. Evol. Microbiol. 50: 1687–1689. [No abstract available. doi:10.1099/00207713-50-4-1687. PMID10939677.
Hansmann, S; Martin W (2000). "Phylogeny of 33 ribosomal and six other proteins encoded in an ancient gene cluster that is conserved across prokaryotic genomes: influence of excluding poorly alignable sites from analysis". Int. J. Syst. Evol. Microbiol. 50: 1655–1663. doi:10.1099/00207713-50-4-1655. PMID10939673.
Tindall, BJ (1999). "Proposal to change the Rule governing the designation of type strains deposited under culture collection numbers allocated for patent purposes". Int. J. Syst. Bacteriol. 49 (3): 1317–1319. doi:10.1099/00207713-49-3-1317. PMID10490293.
Tindall, BJ (1999). "Proposal to change Rule 18a, Rule 18f and Rule 30 to limit the retroactive consequences of changes accepted by the ICSB". Int. J. Syst. Bacteriol. 49 (3): 1321–1322. doi:10.1099/00207713-49-3-1321. PMID10425797.
Tindall, BJ (1999). "Proposals to update and make changes to the Bacteriological Code". Int. J. Syst. Bacteriol. 49 (3): 1309–1312. doi:10.1099/00207713-49-3-1309. PMID10425795.
Palys, T; Nakamura LK; Cohan FM (1997). "Discovery and classification of ecological diversity in the bacterial world: the role of DNA sequence data". Int. J. Syst. Bacteriol. 47 (4): 1145–1156. doi:10.1099/00207713-47-4-1145. PMID9336922.
Euzeby, JP (1997). "List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet". Int. J. Syst. Bacteriol. 47 (2): 590–592. doi:10.1099/00207713-47-2-590. PMID9103655.
Murray, RG; Schleifer KH (1994). "Taxonomic notes: a proposal for recording the properties of putative taxa of procaryotes". Int. J. Syst. Bacteriol. 44 (1): 174–176. doi:10.1099/00207713-44-1-174. PMID8123559.
Winker, S; Woese CR (1991). "A definition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA characteristics". Syst. Appl. Microbiol. 14 (4): 305–310. doi:10.1016/s0723-2020(11)80303-6. PMID11540071.
